TY - JOUR
T1 - In-vitro enzyme inhibition, kinetics, molecular docking and dynamics simulation approaches to decoding the mechanism of Ficus virens in cholinesterase inhibition
AU - Albadrani, Hind Muteb
AU - Alsaweed, Mohammed
AU - Jamal, Qazi Mohammad Sajid
AU - Alasiry, Sharifa M.
AU - Jahan, Sadaf
AU - Hamed, Munerah
AU - Kamal, Mehnaz
AU - Rehman, Md Tabish
AU - Iqbal, Danish
N1 - Publisher Copyright:
© 2024 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.
PY - 2024
Y1 - 2024
N2 - In the current study, we investigate the bioactive potentials and mode of action of Ficus virens bark (FVB) extract against cholinesterase enzymes, via in-vitro cell-free cholinesterase inhibition kinetics, molecular docking, ADMET and dynamic simulation. Our results illustrated that FVBM extract showed better DPPH-free radical scavenging activity (IC50 = 17.8 ± 0.46 µg/ml) and AChE inhibitory ability (IC50 = 37.2 ± 0.43 µg/ml). Kinetics study explored the mixed inhibition of AChE enzyme by FVBM extract. Furthermore, molecular docking demonstrates that compounds Diethyl Phthalate and Dinopol NOP present in FVBM extract have good ΔG: −8.6 kcal/mol and Ki; 2.01 × 106 M−1 for AChE enzyme than BuChE enzyme (ΔG: −7.6 and Ki: 3.72 × 105 M−1). A simulation study of 200 ns of best two hits and Tacrine confirms that these compounds remained inside the binding pocket of proteins and formed a stable protein-ligand complex via interacting with key residue. Further studies could provide a better understanding of the therapeutic potential of these promising compounds.
AB - In the current study, we investigate the bioactive potentials and mode of action of Ficus virens bark (FVB) extract against cholinesterase enzymes, via in-vitro cell-free cholinesterase inhibition kinetics, molecular docking, ADMET and dynamic simulation. Our results illustrated that FVBM extract showed better DPPH-free radical scavenging activity (IC50 = 17.8 ± 0.46 µg/ml) and AChE inhibitory ability (IC50 = 37.2 ± 0.43 µg/ml). Kinetics study explored the mixed inhibition of AChE enzyme by FVBM extract. Furthermore, molecular docking demonstrates that compounds Diethyl Phthalate and Dinopol NOP present in FVBM extract have good ΔG: −8.6 kcal/mol and Ki; 2.01 × 106 M−1 for AChE enzyme than BuChE enzyme (ΔG: −7.6 and Ki: 3.72 × 105 M−1). A simulation study of 200 ns of best two hits and Tacrine confirms that these compounds remained inside the binding pocket of proteins and formed a stable protein-ligand complex via interacting with key residue. Further studies could provide a better understanding of the therapeutic potential of these promising compounds.
KW - Alzheimer’s disease
KW - Ficus virens
KW - acetylcholinesterase
KW - butyrylcholinesterase
KW - enzyme kinetics
KW - molecular dynamics simulation
UR - http://www.scopus.com/inward/record.url?scp=85204874557&partnerID=8YFLogxK
U2 - 10.1080/16583655.2024.2403813
DO - 10.1080/16583655.2024.2403813
M3 - Article
AN - SCOPUS:85204874557
SN - 1658-3655
VL - 18
JO - Journal of Taibah University for Science
JF - Journal of Taibah University for Science
IS - 1
M1 - 2403813
ER -