Structure of N-(adamantan-2-ylidene)benzohydrazide, a potential antibacterial agent, in solution: Molecular dynamics simulations, quantum chemical calculations and Ultraviolet–visible spectroscopy studies

  • Alexander M. Andrianov
  • , Ivan A. Kashyn
  • , Viktor M. Andrianov
  • , Maksim B. Shundalau
  • , Anton V. Hlinisty
  • , Sergey V. Gaponenko
  • , Elena V. Shabunya-Klyachkovskaya
  • , Anna Matsukovich
  • , Abdul Malek S. Al-Tamimi
  • , Ali A. El-Emam

Research output: Contribution to journalArticlepeer-review

4 Scopus citations

Abstract

The molecular dynamics simulations of the structure of the N-(adamantan-2-ylidene) benzohydrazide followed by the quantum chemical calculations at the DFT level of theory have identified four stable conformers of this potential antibacterial agent in solution: one “central” cis- and three (“central”, “left” and “right”) trans-conformers. The UV-Vis absorption spectrum in the 220–320 nm region in the ethanol solution reveals two bands that can be primarily explained based on the ab initio calculations of the spectral characteristics of the “side” trans-conformers at the MRPT level of theory. However, the close energy values for the calculated cis- S1 ← S0 and “side” trans- S2 ← S0 transitions cannot exclude the presence of cis-conformer in solution. Therefore, the data obtained show that the coexistence of both trans-conformers and cis-conformer should be taken into consideration when studying the pharmaceutical properties of the title molecule. [Figure not available: see fulltext.]

Original languageEnglish
Pages (from-to)1933-1942
Number of pages10
JournalJournal of Chemical Sciences
Volume128
Issue number12
DOIs
StatePublished - 1 Dec 2016

Keywords

  • conformers
  • DFT calculations
  • molecular dynamics simulations
  • multi-reference perturbation theory calculations
  • N-(adamantan-2-ylidene)benzohydrazide
  • UV-Vis spectrum

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