Development of a candidate multi-epitope vaccine against Sphingobacterium spiritivorum Reverse vaccinology and immunoinformatics approach

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Abstract

Objectives: To develop a candidate vaccine aginst the Sphingobacterium spiritivorum. Methods: Since there is currently no vaccine against this pathogen, we employed in-silico methods to extensively explore the outer membrane toxin-producing proteins found specifically in S. spiritivorum to forecast a multi-epitope chimeric vaccine design. This computational study was conducted in Saudi Arabia in 2022 (study design: computational; ethical approval not applicable). Results: TThe vaccine peptide comprises multiple linear and conformational B-cell epitopes, which have the potential to elicit humoral immunity. Projected B-cell- derived T-cell epitopes for outer membrane proteins are present in the produced protein. The docking and molecular dynamic simulation results indicating that the chimeric vaccine had adequate binding stability with TLR-4. Following the immunological simulation, significant levels of immune cell expression were observed as immunoglobulin (Ig) M and IgG, IgM, IgM1, and IgM2, and independently IgG1 and IgG2. Conclusion: The developed vaccine candidate is suitable for further testing and can assist experimental vaccinologists in developing an effective vaccine against S. spiritivorum.

Original languageEnglish
Pages (from-to)544-559
Number of pages16
JournalSaudi Medical Journal
Volume44
Issue number6
DOIs
StatePublished - 1 Jun 2023

Keywords

  • Sphingobacterium spiritivorum
  • binding free energies calculation
  • chimeric vaccine
  • conformational B-cell epitopes
  • molecular docking

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